Basic Information
Locus ID:
gene:TRIDC7BG024420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 222444873 | 222446315 | - | gene:TRIDC7BG024420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 27,496.70 Da | 75.74 | 75.64 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 216 | 253 | 1.72505E-9 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 214 | 259 | 8.6E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 215 | 260 | 1.7E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 181 | 264 | 2.2E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 216 | 253 | 1.1E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 216 | 254 | 11.589345 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 231 | 240 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 193 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25030.3 | - | 0 |
| RefSeq | XP_037463645.1 | predicted GPI-anchored protein 58 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6SI30 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG024420.