Basic Information
Locus ID:
gene:TRIDC7BG024390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
domain in protein kinases, N-glycanases and other nuclear proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 221787236 | 221792777 | + | gene:TRIDC7BG024390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 39,915.05 Da | 58.09 | 83.22 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10461 | PUB_UBA_plant | 240 | 346 | 5.81012E-53 | - |
| Pfam | PF09409 | PUB domain | 253 | 323 | 9.0E-24 | IPR018997 |
| Pfam | PF00627 | UBA/TS-N domain | 8 | 43 | 1.9E-6 | IPR015940 |
| SUPERFAMILY | SSF46934 | UBA-like | 4 | 57 | 8.41E-14 | IPR009060 |
| SUPERFAMILY | SSF143503 | PUG domain-like | 231 | 342 | 6.8E-27 | IPR036339 |
| Gene3D | G3DSA:1.20.58.2190 | - | 239 | 334 | 3.5E-27 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 5 | 46 | 6.0E-18 | - |
| SMART | SM00580 | PGNneu | 256 | 319 | 1.0E-18 | - |
| SMART | SM00165 | uba_6 | 7 | 45 | 4.5E-4 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 5 | 46 | 11.679399 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 205 | - | - |
| Coils | Coil | Coil | 164 | 200 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04850.2 | - | 0 |
| RefSeq | XP_037466493.1 | UBX domain-containing protein 1-A-like [Triticum dicoccoides] | 0 |
| Q9ZU93 | Plant UBX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUX2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6SDF6 | UBA domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG024390.