Basic Information
Locus ID:
gene:TRIDC7BG024340
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 220965566 | 220967773 | - | gene:TRIDC7BG024340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 21,335.86 Da | 56.66 | 66.68 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 141 | 178 | 1.1E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 140 | 185 | 5.05E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 105 | 197 | 4.2E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 141 | 178 | 8.1E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 141 | 179 | 12.961374 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 156 | 165 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037469239.1 | E3 ubiquitin-protein ligase RNF4-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6SDF0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG024340.