Basic Information
Locus ID:
gene:TRIDC7BG023870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 215305621 | 215306763 | + | gene:TRIDC7BG023870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 31,369.42 Da | 61.82 | 95.25 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 94 | 137 | 5.96599E-17 | - |
| Pfam | PF13639 | Ring finger domain | 94 | 137 | 1.6E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 94 | 141 | 3.76E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 49 | 142 | 1.2E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 95 | 136 | 5.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 95 | 137 | 12.592549 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 261 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037467603.1 | RING-H2 finger protein ATL16-like [Triticum dicoccoides] | 0 |
| P93823 | RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SHT0 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG023870.