Basic Information
Locus ID:
gene:TRIDC7BG020050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PHD-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 166655149 | 166660644 | + | gene:TRIDC7BG020050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 77,049.68 Da | 57.38 | 65.29 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04370 | BAH | 582 | 709 | 4.55983E-21 | - |
| Pfam | PF00628 | PHD-finger | 238 | 285 | 1.5E-7 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 233 | 296 | 1.09E-11 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 136 | 292 | 2.2E-10 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 554 | 713 | 1.3E-23 | IPR043151 |
| SMART | SM00249 | PHD_3 | 237 | 285 | 1.5E-7 | IPR001965 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 583 | 709 | 12.454371 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 235 | 287 | 9.0183 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 238 | 284 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 386 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20280.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_037468483.1 | uncharacterized protein LOC119340664 isoform X2 [Triticum dicoccoides] | 0 |
| Q5PNS0 | PHD finger protein At3g20280 OS=Arabidopsis thaliana OX=3702 GN=At3g20280 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453RER0 | PHD-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG020050.