Basic Information
Locus ID:
gene:TRIDC7BG018850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 156956357 | 156961640 | - | gene:TRIDC7BG018850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 54,922.66 Da | 39.29 | 93.36 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16479 | RING-H2_synoviolin | 289 | 330 | 2.07459E-27 | - |
| Pfam | PF13639 | Ring finger domain | 291 | 330 | 1.6E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 272 | 338 | 8.62E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 264 | 339 | 1.0E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 292 | 329 | 1.1E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 292 | 330 | 12.607302 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 366 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16090.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037463723.1 | ERAD-associated E3 ubiquitin-protein ligase HRD1-like [Triticum dicoccoides] | 0 |
| Q5Z880 | ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SGY8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG018850.