Basic Information
Locus ID:
gene:TRIDC7BG017170
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 142613113 | 142619101 | + | gene:TRIDC7BG017170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 66,768.79 Da | 36.27 | 93.68 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 111 | 133 | 0.33 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 59 | 6.4E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 292 | 558 | 4.9E-43 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 184 | 1.87E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 267 | 559 | 1.13E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 366 | 577 | 6.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 258 | 365 | 2.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 201 | 5.1E-55 | IPR032675 |
| SMART | SM00220 | serkin_6 | 289 | 544 | 3.9E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 289 | 579 | 35.029011 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 295 | 317 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 408 | 420 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_037468026.1 | LRR receptor kinase SERL2-like [Triticum dicoccoides] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SC15 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG017170.