Basic Information
Locus ID:
gene:TRIDC7BG008200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 62952015 | 62953133 | + | gene:TRIDC7BG008200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 40,002.14 Da | 60.48 | 83.03 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 125 | 168 | 3.96081E-19 | - |
| Pfam | PF13639 | Ring finger domain | 125 | 168 | 2.2E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 120 | 173 | 2.52E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 82 | 173 | 9.2E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 126 | 167 | 9.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 126 | 168 | 12.208971 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 214 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G18650.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037467687.1 | putative RING-H2 finger protein ATL49 [Triticum dicoccoides] | 0 |
| Q9ZV53 | Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6SEI1 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG008200.