Basic Information
Locus ID:
gene:TRIDC7BG007530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 57245809 | 57252638 | - | gene:TRIDC7BG007530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.83 | 110,261.26 Da | 49.13 | 65.64 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 165 | 468 | 5.15617E-167 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 167 | 467 | 3.1E-56 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 165 | 469 | 1.31E-92 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 164 | 480 | 9.0E-98 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 166 | 470 | 54.022423 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 167 | 182 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 412 | 430 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 838 | 853 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 781 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 862 | 896 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 802 | 825 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 950 | 977 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 998 | 1012 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 1012 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 909 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57990.1 | ubiquitin-specific protease 23. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037464861.1 | ubiquitin carboxyl-terminal hydrolase 23-like [Triticum dicoccoides] | 0 |
| Q9FPS4 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6SCP4 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG007530.