halophFGD

Basic Information

Locus ID: gene:TRIDC7BG004030

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: MIZ/SP-RING zinc finger

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
7B	28879503	28888523	-	gene:TRIDC7BG004030

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.74	96,042.36 Da	61.04	75.05	-0.46

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd16650	SP-RING_PIAS_like	322	368	1.47508E-22	-
Pfam	PF02891	MIZ/SP-RING zinc finger	321	369	6.0E-20	IPR004181
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	283	407	7.1E-35	IPR013083
ProSiteProfiles	PS51044	Zinc finger SP-RING-type profile.	310	387	36.591221	IPR004181
MobiDBLite	mobidb-lite	consensus disorder prediction	1	25	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	748	770	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	411	435	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	748	763	-	-

Gene Ontology

Molecular Function:

GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K04706 (E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-])

Pathway:

ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis) map04630 (JAK-STAT signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G41580.1	RING/U-box superfamily protein.
RefSeq	XP_037469206.1	E4 SUMO-protein ligase PIAL2-like [Triticum dicoccoides]
Swiss-Prot	F4JYG0	E4 SUMO-protein ligase PIAL2 OS=Arabidopsis thaliana OX=3702 GN=PIAL2 PE=1 SV=1
TrEMBL	A0A3B6SBY8	SP-RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7BG004030.