Basic Information
Locus ID:
gene:TRIDC7BG003310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 23701781 | 23706237 | - | gene:TRIDC7BG003310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 42,394.32 Da | 51.48 | 96.93 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 305 | 346 | 2.86463E-17 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 24 | 269 | 2.1E-39 | IPR001245 |
| Pfam | PF04564 | U-box domain | 301 | 372 | 3.6E-21 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 268 | 3.51E-62 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 290 | 373 | 9.18E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 89 | 299 | 1.1E-46 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 300 | 375 | 2.9E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 88 | 4.1E-24 | - |
| SMART | SM00504 | Ubox_2 | 304 | 367 | 1.7E-27 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 280 | 28.923124 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 300 | 374 | 39.055531 | IPR003613 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037460424.1 | U-box domain-containing protein 70-like [Triticum dicoccoides] | 0 |
| Q5WA76 | U-box domain-containing protein 70 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB70 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6TA30 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG003310.