Basic Information
Locus ID:
gene:TRIDC7BG001620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 11112090 | 11132453 | - | gene:TRIDC7BG001620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 7,788.82 Da | 30.08 | 95.97 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 2 | 59 | 1.5E-12 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 62 | 1.33E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 60 | 2.3E-15 | - |
| SMART | SM00213 | ubq_7 | 1 | 62 | 4.5E-5 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 59 | 10.135658 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09790.1 | ubiquitin 8. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_037468675.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| Q39256 | Polyubiquitin 8 OS=Arabidopsis thaliana OX=3702 GN=UBQ8 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8R7U114 | Polyubiquitin OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG001620.