Basic Information
Locus ID:
gene:TRIDC7BG000720
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 4093248 | 4094934 | + | gene:TRIDC7BG000720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 32,644.38 Da | 65.91 | 75.68 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 56 | 115 | 3.1683E-14 | - |
| Pfam | PF00240 | Ubiquitin family | 125 | 196 | 1.3E-16 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 56 | 120 | 6.1E-13 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 123 | 203 | 2.7E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 47 | 117 | 9.46E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 46 | 122 | 5.4E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 123 | 222 | 1.7E-24 | - |
| SMART | SM00213 | ubq_7 | 54 | 118 | 7.5E-12 | IPR000626 |
| SMART | SM00213 | ubq_7 | 123 | 194 | 4.1E-14 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 123 | 185 | 18.649839 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 54 | 122 | 10.375188 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 176 | 197 | 3.2E-11 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 155 | 175 | 3.2E-11 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 134 | 154 | 3.2E-11 | IPR019956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 294 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_037467497.1 | polyubiquitin-like isoform X1 [Triticum dicoccoides] | 0 |
| P62972 | Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6UAT4 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG000720.