Basic Information
Locus ID:
gene:TRIDC7BG000710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7B | 4089736 | 4090825 | + | gene:TRIDC7BG000710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 25,589.00 Da | 57.58 | 77.19 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 66 | 128 | 2.6E-14 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 136 | 207 | 1.6E-20 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 59 | 129 | 2.81E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 131 | 208 | 5.18E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 57 | 132 | 6.6E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 133 | 215 | 3.1E-28 | - |
| SMART | SM00213 | ubq_7 | 64 | 128 | 6.7E-12 | IPR000626 |
| SMART | SM00213 | ubq_7 | 134 | 205 | 5.0E-19 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 134 | 209 | 22.133904 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 64 | 128 | 13.010011 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 160 | 185 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 165 | 185 | 2.7E-21 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 144 | 164 | 2.7E-21 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 186 | 207 | 2.7E-21 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_037467978.1 | polyubiquitin-like [Triticum dicoccoides] | 0 |
| P62972 | Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6U5T9 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7BG000710.