Basic Information
Locus ID:
gene:TRIDC7AG078400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PHD zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 727169398 | 727174995 | + | gene:TRIDC7AG078400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 85,658.67 Da | 46.58 | 72.03 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 139 | 194 | 1.9E-17 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 368 | 417 | 2.1E-15 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 435 | 476 | 6.1E-8 | IPR019787 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 676 | 763 | 2.17E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 421 | 480 | 4.32E-16 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 523 | 576 | 2.88E-8 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 420 | 499 | 4.3E-19 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 522 | 581 | 6.4E-12 | IPR013083 |
| SMART | SM00249 | PHD_3 | 434 | 475 | 2.1E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 522 | 578 | 7.9E-4 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 432 | 477 | 10.6292 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 435 | 474 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 94 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_044425683.1 | uncharacterized protein LOC123149955 isoform X1 [Triticum aestivum] | 0 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7R9B0 | PHD-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG078400.