HalophFGD

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Basic Information
Locus ID: gene:TRIDC7AG076130
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: protein modification by small protein conjugation or removal
Maps and Mapping Data
Chromosome Start End Strand ID
7A 714669241 714670483 - gene:TRIDC7AG076130
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.81 36,969.27 Da 38.06 90.75 0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 30 145 1.59946E-15 IPR002083
Pfam PF00651 BTB/POZ domain 159 269 3.5E-24 IPR000210
SUPERFAMILY SSF54695 POZ domain 151 270 8.44E-30 IPR011333
SUPERFAMILY SSF49599 TRAF domain-like 28 152 7.85E-21 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 149 271 4.3E-33 IPR011333
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 30 148 1.0E-14 IPR008974
Gene3D G3DSA:1.25.40.420 - 272 333 1.7E-18 -
SMART SM00225 BTB_4 168 270 7.7E-25 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 168 238 17.086378 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 29 145 11.006935 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06190.1 BTB-POZ and MATH domain 2. 0
RefSeq XP_037462639.1 BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] 0
Swiss-Prot Q9M8J9 BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 0
TrEMBL A0A3B6UB46 BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7AG076130.

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