Basic Information
Locus ID:
gene:TRIDC7AG075360
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
FFAT motif binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 710149849 | 710156908 | + | gene:TRIDC7AG075360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 57,036.68 Da | 46.88 | 80.88 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 204 | 433 | 4.02813E-40 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 355 | 392 | 7.4E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 309 | 348 | 1.4E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 397 | 433 | 0.088 | IPR001680 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 47 | 144 | 7.6E-16 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 39 | 169 | 7.33E-22 | IPR008962 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 184 | 469 | 1.21E-53 | IPR036322 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 39 | 167 | 3.9E-26 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 187 | 476 | 1.3E-73 | IPR015943 |
| SMART | SM00320 | WD40_4 | 308 | 348 | 7.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 264 | 304 | 5.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 178 | 218 | 1.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 351 | 392 | 1.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 395 | 433 | 1.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 221 | 260 | 3.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 438 | 475 | 490.0 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 44 | 164 | 18.187553 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 358 | 394 | 9.388329 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 401 | 433 | 9.539323 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 315 | 357 | 12.914561 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 315 | 351 | 10.047417 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 358 | 401 | 12.714052 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 379 | 393 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 379 | 393 | 6.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 420 | 434 | 6.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 335 | 349 | 6.0E-6 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79990.2 | structural molecules. | 0 |
| RefSeq | XP_037459026.1 | uncharacterized protein LOC119330021 isoform X1 [Triticum dicoccoides] | 0 |
| Q54YD8 | Coatomer subunit beta' OS=Dictyostelium discoideum OX=44689 GN=copb2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6RPQ1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG075360.