Basic Information
Locus ID:
gene:TRIDC7AG074480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
UTP15 C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 705420408 | 705422997 | + | gene:TRIDC7AG074480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 58,354.49 Da | 40.00 | 87.45 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 224 | 253 | 0.0076 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 194 | 212 | 0.044 | IPR001680 |
| Pfam | PF09384 | UTP15 C terminal | 385 | 527 | 3.7E-35 | IPR018983 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 50 | 339 | 7.0E-44 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 251 | 360 | 1.1E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 29 | 250 | 3.6E-29 | IPR015943 |
| SMART | SM00320 | WD40_4 | 83 | 121 | 190.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 257 | 300 | 0.24 | IPR001680 |
| SMART | SM00320 | WD40_4 | 126 | 168 | 6.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 171 | 212 | 5.1E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 216 | 253 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 341 | 9.3 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 179 | 221 | 10.374778 | IPR001680 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47990.1 | transducin family protein / WD-40 repeat family protein. Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant. | 0 |
| RefSeq | XP_037456875.1 | protein SLOW WALKER 1-like [Triticum dicoccoides] | 0 |
| O82266 | Protein SLOW WALKER 1 OS=Arabidopsis thaliana OX=3702 GN=SWA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RSD0 | UTP15_C domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG074480.