Basic Information
Locus ID:
gene:TRIDC7AG073610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 701718194 | 701720634 | - | gene:TRIDC7AG073610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 27,038.61 Da | 60.22 | 81.92 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 196 | 239 | 6.49977E-16 | - |
| Pfam | PF13639 | Ring finger domain | 197 | 239 | 8.8E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 184 | 245 | 1.7E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 156 | 243 | 8.0E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 197 | 238 | 1.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 197 | 239 | 12.754832 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17730.1 | NEP-interacting protein 2. Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane. | 0 |
| RefSeq | XP_037462594.1 | NEP1-interacting protein-like 1 [Triticum dicoccoides] | 0 |
| Q8GT74 | NEP1-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=NIP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RS55 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG073610.