Basic Information
Locus ID:
gene:TRIDC7AG073430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin ligase SUD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 701080494 | 701086519 | - | gene:TRIDC7AG073430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 118,649.04 Da | 36.59 | 112.44 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16702 | RING_CH-C4HC3_MARCH6 | 6 | 55 | 9.60931E-29 | - |
| Pfam | PF12906 | RING-variant domain | 7 | 53 | 1.3E-15 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 3 | 57 | 7.46E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 65 | 5.0E-21 | IPR013083 |
| SMART | SM00744 | ringv_2 | 6 | 54 | 3.7E-22 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 7 | 54 | 8.86004 | IPR001841 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 1 | 60 | 23.218626 | IPR011016 |
| Coils | Coil | Coil | 220 | 254 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34100.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037457741.1 | probable E3 ubiquitin ligase SUD1 isoform X2 [Triticum dicoccoides] | 0 |
| F4JKK0 | Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6TZ95 | RING-CH-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG073430.