Basic Information
Locus ID:
gene:TRIDC7AG069740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 685322818 | 685330539 | + | gene:TRIDC7AG069740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 105,524.74 Da | 50.34 | 65.25 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 110 | 415 | 3.58685E-159 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 110 | 414 | 6.7E-44 | IPR001394 |
| Pfam | PF01753 | MYND finger | 4 | 41 | 2.5E-9 | IPR002893 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 109 | 416 | 2.16E-83 | IPR038765 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 3 | 45 | 1.64E-11 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 2 | 46 | 7.4E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 107 | 422 | 5.3E-89 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 4 | 41 | 12.103909 | IPR002893 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 110 | 417 | 49.258724 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 111 | 126 | - | IPR018200 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 4 | 41 | - | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 744 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 932 | 962 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 744 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 820 | 844 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 821 | 836 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 803 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 649 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24640.1 | ubiquitin-specific protease 19. | 0 |
| RefSeq | XP_037462904.1 | ubiquitin carboxyl-terminal hydrolase 42-like [Triticum dicoccoides] | 0 |
| Q9SJA1 | Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7R3W8 | Ubiquitin carboxyl-terminal hydrolase 19 OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG069740.