Basic Information
Locus ID:
gene:TRIDC7AG066900
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin elongating factor core
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 667930412 | 667934986 | + | gene:TRIDC7AG066900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 94,626.80 Da | 47.95 | 92.45 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16657 | RING-Ubox_UBE4A | 748 | 817 | 4.97594E-38 | - |
| Pfam | PF10408 | Ubiquitin elongating factor core | 99 | 729 | 2.0E-204 | IPR019474 |
| Pfam | PF04564 | U-box domain | 746 | 817 | 5.1E-28 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 738 | 815 | 4.06E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 745 | 825 | 1.6E-26 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 749 | 812 | 8.8E-22 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 745 | 819 | 28.308006 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 818 | 839 | - | - |
| Coils | Coil | Coil | 324 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15400.1 | U-box domain-containing protein. | 0 |
| RefSeq | XP_037458861.1 | probable ubiquitin conjugation factor E4 [Triticum dicoccoides] | 0 |
| Q9LF41 | Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana OX=3702 GN=PUB1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RQT0 | U-box domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG066900.