Basic Information
Locus ID:
gene:TRIDC7AG066780
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 667433783 | 667434347 | + | gene:TRIDC7AG066780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 18,459.14 Da | 64.16 | 88.09 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 106 | 148 | 9.27027E-16 | - |
| Pfam | PF13639 | Ring finger domain | 106 | 148 | 9.2E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 102 | 154 | 1.09E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 154 | 8.7E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 106 | 147 | 4.0E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 106 | 148 | 12.489278 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17450.1 | RING-H2 finger A3A. Encodes a putative RING-H2 finger protein RHA3a. | 0 |
| RefSeq | XP_037458086.1 | probable E3 ubiquitin-protein ligase ATL44 [Triticum dicoccoides] | 0 |
| O22755 | Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RQT9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG066780.