halophFGD

Basic Information

Locus ID: gene:TRIDC7AG066010

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: BTB/POZ domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
7A	664249035	664251079	-	gene:TRIDC7AG066010

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.46	40,683.73 Da	35.69	100.71	0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18280	BTB_POZ_BPM_plant	182	297	1.65793E-47	-
Pfam	PF00651	BTB/POZ domain	187	297	4.8E-25	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	29	163	2.78E-9	-
SUPERFAMILY	SSF54695	POZ domain	176	297	2.35E-31	IPR011333
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	33	163	3.4E-6	IPR008974
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	172	294	1.4E-38	IPR011333
Gene3D	G3DSA:1.25.40.420	-	300	367	1.7E-19	-
SMART	SM00225	BTB_4	196	300	4.3E-20	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	196	263	17.231152	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.
RefSeq	XP_037463138.1	BTB/POZ and MATH domain-containing protein 1-like isoform X1 [Triticum dicoccoides]
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1
TrEMBL	A0A3B6RLS3	BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7AG066010.