Basic Information
Locus ID:
gene:TRIDC7AG065880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Vacuolar protein sorting-associated protein 8 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 663364623 | 663376922 | + | gene:TRIDC7AG065880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 79,026.52 Da | 40.53 | 84.92 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12816 | Golgi CORVET complex core vacuolar protein 8 | 609 | 792 | 1.1E-54 | IPR025941 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 133 | 180 | 1.3E-4 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 86 | 409 | 4.66E-16 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 63 | 251 | 9.3E-13 | IPR015943 |
| SMART | SM00320 | WD40_4 | 168 | 207 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 123 | 165 | 0.0024 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 140 | 174 | 10.675542 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| Coils | Coil | Coil | 495 | 495 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00800.2 | - | 0 |
| RefSeq | XP_048540112.1 | vacuolar protein sorting-associated protein 8 homolog [Triticum urartu] | 0 |
| Q0P5W1 | Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7R7I8 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG065880.