Basic Information
Locus ID:
gene:TRIDC7AG065250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Transcription initiation factor TFIID subunit 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 659175240 | 659176477 | - | gene:TRIDC7AG065250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 15,654.76 Da | 39.50 | 78.76 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 1 | 30 | 7.7E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 76 | 114 | 3.2E-10 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 34 | 72 | 2.7E-9 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1 | 122 | 2.99E-42 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 78 | 133 | 9.5E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 77 | 1.9E-30 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1 | 30 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 33 | 72 | 1.3E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 75 | 114 | 1.4E-10 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1 | 35 | 12.103769 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 40 | 81 | 16.256382 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 82 | 123 | 15.019908 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 82 | 114 | 11.945589 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 40 | 76 | 13.290127 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1 | 39 | 15.186998 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 17 | 31 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 59 | 73 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 59 | 73 | 1.2E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 17 | 31 | 1.2E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 101 | 115 | 1.2E-9 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031127742.1 | transcription initiation factor TFIID subunit 5-like [Ipomoea triloba] | 0 |
| G5EF68 | Transcription initiation factor TFIID subunit 5 OS=Caenorhabditis elegans OX=6239 GN=taf-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6J503 | Transcription initiation factor TFIID subunit 5 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d025112 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG065250.