Basic Information
Locus ID:
gene:TRIDC7AG065130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 658836274 | 658881364 | - | gene:TRIDC7AG065130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 18,356.86 Da | 31.02 | 96.85 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01803 | Ubl_ubiquitin | 1 | 76 | 2.53037E-51 | - |
| CDD | cd01803 | Ubl_ubiquitin | 77 | 152 | 2.68094E-49 | - |
| Pfam | PF00240 | Ubiquitin family | 3 | 74 | 6.8E-34 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 79 | 147 | 5.7E-33 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 76 | 153 | 6.35E-34 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 76 | 3.66E-34 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 77 | 2.7E-47 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 78 | 164 | 4.9E-46 | - |
| SMART | SM00213 | ubq_7 | 77 | 148 | 2.4E-33 | IPR000626 |
| SMART | SM00213 | ubq_7 | 1 | 72 | 3.0E-35 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 77 | 152 | 29.711742 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 76 | 30.452106 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 103 | 128 | - | IPR019954 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 27 | 52 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 53 | 74 | 6.3E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 32 | 52 | 6.3E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 11 | 31 | 6.3E-39 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_026382436.1 | polyubiquitin [Papaver somniferum] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SMA3 | Polyubiquitin OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG065130.