Basic Information
Locus ID:
gene:TRIDC7AG063890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function (DUF4704)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 650763803 | 650793321 | + | gene:TRIDC7AG063890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 355,466.41 Da | 44.79 | 99.39 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06071 | Beach | 2498 | 2775 | 2.34109E-148 | IPR000409 |
| CDD | cd01201 | PH_BEACH | 2319 | 2464 | 9.07864E-21 | IPR023362 |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 2326 | 2457 | 1.1E-13 | IPR023362 |
| Pfam | PF00400 | WD domain, G-beta repeat | 2910 | 2946 | 1.5E-5 | IPR001680 |
| Pfam | PF15787 | Domain of unknown function (DUF4704) | 1263 | 1537 | 1.8E-75 | IPR031570 |
| Pfam | PF00400 | WD domain, G-beta repeat | 2975 | 3008 | 0.003 | IPR001680 |
| Pfam | PF13385 | Concanavalin A-like lectin/glucanases superfamily | 1030 | 1200 | 4.6E-9 | - |
| Pfam | PF02138 | Beige/BEACH domain | 2498 | 2775 | 2.8E-119 | IPR000409 |
| SUPERFAMILY | SSF50729 | PH domain-like | 2319 | 2463 | 1.91E-19 | - |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1022 | 1208 | 2.64E-19 | IPR013320 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2880 | 3138 | 3.1E-36 | IPR036322 |
| SUPERFAMILY | SSF81837 | BEACH domain | 2482 | 2775 | 3.27E-123 | IPR036372 |
| SUPERFAMILY | SSF48371 | ARM repeat | 879 | 1718 | 8.06E-5 | IPR016024 |
| Gene3D | G3DSA:2.60.120.200 | - | 1020 | 1214 | 2.1E-13 | - |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 2489 | 2775 | 2.3E-134 | IPR036372 |
| Gene3D | G3DSA:2.130.10.10 | - | 2808 | 3070 | 1.4E-25 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 3071 | 3151 | 1.5E-5 | IPR015943 |
| Gene3D | G3DSA:2.30.29.30 | - | 2318 | 2457 | 4.7E-20 | IPR011993 |
| SMART | SM00320 | WD40_4 | 2908 | 2947 | 8.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3098 | 3136 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2973 | 3012 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3057 | 3095 | 99.0 | IPR001680 |
| SMART | SM01026 | Beach_2 | 2497 | 2775 | 1.5E-194 | IPR000409 |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 2485 | 2775 | 121.324501 | IPR000409 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 2915 | 2946 | 10.521959 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 2915 | 2946 | 12.647216 | IPR001680 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 2315 | 2461 | 28.526115 | IPR023362 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2274 | 2298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2274 | 2312 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58230.2 | - | 0 |
| RefSeq | XP_037457937.1 | BEACH domain-containing protein B-like isoform X1 [Triticum dicoccoides] | 0 |
| F4I9T0 | BEACH domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=BCHB PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6RQ98 | BEACH domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG063890.