Basic Information
Locus ID:
gene:TRIDC7AG062890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 643718367 | 643718840 | - | gene:TRIDC7AG062890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 9,243.56 Da | 33.00 | 97.44 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01803 | Ubl_ubiquitin | 1 | 75 | 3.18768E-47 | - |
| Pfam | PF00240 | Ubiquitin family | 3 | 72 | 5.0E-31 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 75 | 1.82E-30 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 87 | 5.6E-44 | - |
| SMART | SM00213 | ubq_7 | 1 | 71 | 1.9E-32 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 65 | 25.247786 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 27 | 52 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 32 | 52 | 1.8E-27 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 11 | 31 | 1.8E-27 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 53 | 74 | 1.8E-27 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05050.4 | ubiquitin 11. polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. | 0 |
| RefSeq | XP_020577450.1 | ubiquitin, partial [Phalaenopsis equestris] | 0 |
| P0CG83 | Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1 | 0 | |
| TrEMBL | A0A078JZK2 | BnaUnng04590D protein (Fragment) OS=Brassica napus OX=3708 GN=BnaUnng04590D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG062890.