Basic Information
Locus ID:
gene:TRIDC7AG061710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Vacuolar protein sorting-associated protein 8 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 634245712 | 634257338 | - | gene:TRIDC7AG061710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 87,437.68 Da | 50.31 | 80.11 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 441 | 491 | 2.0E-5 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 393 | 727 | 4.58E-16 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 375 | 569 | 4.1E-13 | IPR015943 |
| SMART | SM00320 | WD40_4 | 479 | 518 | 65.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 434 | 476 | 0.0018 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 444 | 485 | 10.742378 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 89 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00800.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_044424345.1 | vacuolar protein sorting-associated protein 8 homolog [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6SMC8 | Transducin family protein / WD-40 repeat family protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG061710.