Basic Information
Locus ID:
gene:TRIDC7AG059740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 618242198 | 618245708 | - | gene:TRIDC7AG059740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 65,858.34 Da | 63.28 | 61.19 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 541 | 582 | 2.53404E-14 | - |
| Pfam | PF13639 | Ring finger domain | 540 | 582 | 1.6E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 522 | 588 | 1.81E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 499 | 587 | 2.6E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 541 | 581 | 2.4E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 541 | 582 | 11.559839 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 246 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24870.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037459752.1 | probable E3 ubiquitin-protein ligase RHG1A [Triticum dicoccoides] | 0 |
| Q7XTV7 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RPD7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG059740.