Basic Information
Locus ID:
gene:TRIDC7AG055690
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 577040439 | 577041587 | + | gene:TRIDC7AG055690 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 40,416.92 Da | 50.78 | 116.86 | 0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 7 | 49 | 8.91623E-23 | - |
| Pfam | PF04564 | U-box domain | 3 | 74 | 9.9E-18 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 3 | 75 | 1.87E-22 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 206 | 375 | 1.98E-8 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 77 | 4.3E-23 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 188 | 380 | 4.3E-8 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 6 | 73 | 1.2E-22 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 2 | 80 | 26.839621 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49780.1 | plant U-box 26. | 0 |
| RefSeq | XP_020184633.2 | U-box domain-containing protein 25-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9FXA4 | U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RK87 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG055690.