Basic Information
Locus ID:
gene:TRIDC7AG054300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
PUX4
Description:
Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 564286886 | 564291998 | + | gene:TRIDC7AG054300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 31,524.51 Da | 62.19 | 64.61 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01770 | UBX_UBXN2 | 222 | 292 | 1.46957E-36 | - |
| Pfam | PF08059 | SEP domain | 107 | 180 | 4.9E-22 | IPR012989 |
| Pfam | PF00789 | UBX domain | 220 | 291 | 3.2E-18 | IPR001012 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 175 | 292 | 1.52E-26 | IPR029071 |
| SUPERFAMILY | SSF102848 | NSFL1 (p97 ATPase) cofactor p47, SEP domain | 95 | 188 | 1.83E-26 | IPR036241 |
| Gene3D | G3DSA:3.30.420.210 | SEP domain | 101 | 165 | 1.6E-22 | IPR036241 |
| Gene3D | G3DSA:3.10.20.90 | - | 168 | 293 | 8.1E-36 | - |
| SMART | SM00166 | ubx_3 | 215 | 293 | 1.3E-7 | IPR001012 |
| SMART | SM00553 | faf_3 | 99 | 192 | 6.2E-35 | IPR012989 |
| ProSiteProfiles | PS51399 | SEP domain profile. | 102 | 166 | 30.002647 | IPR012989 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 216 | 292 | 19.574202 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 97 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04210.1 | plant UBX domain containing protein 4. Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4) | 0 |
| RefSeq | XP_037457968.1 | plant UBX domain-containing protein 4-like [Triticum dicoccoides] | 0 |
| Q8RWU7 | Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUX4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7V9A8 | UBA and UBX domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG054300.