Basic Information
Locus ID:
gene:TRIDC7AG053550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 557862022 | 557870303 | + | gene:TRIDC7AG053550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 68,754.78 Da | 44.12 | 83.18 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 170 | 432 | 2.77875E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 171 | 433 | 1.2E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 170 | 453 | 1.07E-81 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 459 | 611 | 1.56E-15 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 164 | 260 | 1.3E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 472 | 540 | 1.0E-13 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 450 | 608 | 1.0E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 261 | 449 | 1.1E-58 | - |
| SMART | SM00220 | serkin_6 | 171 | 433 | 1.7E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 171 | 433 | 50.166527 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 295 | 307 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 177 | 203 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 47 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46700.1 | CDPK-related kinase 3. | 0 |
| RefSeq | XP_037457835.1 | CDPK-related kinase 3-like [Triticum dicoccoides] | 0 |
| Q9ZUZ2 | CDPK-related kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RMT6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG053550.