Basic Information
Locus ID:
gene:TRIDC7AG052760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
EFR
Description:
Leucine Rich Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 551056984 | 551060630 | + | gene:TRIDC7AG052760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 64,350.00 Da | 34.55 | 97.04 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 41 | 59 | 0.52 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 277 | 492 | 2.7E-42 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 195 | 3.06E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 254 | 577 | 2.73E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 235 | 357 | 1.0E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 212 | 7.9E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 358 | 588 | 3.6E-54 | - |
| SMART | SM00220 | serkin_6 | 274 | 579 | 2.1E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 274 | 579 | 34.138569 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 407 | 419 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 280 | 305 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037461784.1 | receptor kinase-like protein Xa21 isoform X1 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RMR2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG052760.