Basic Information
Locus ID:
gene:TRIDC7AG052300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
receptor protein kinase ZmPK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 544801208 | 544804840 | - | gene:TRIDC7AG052300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 86,494.53 Da | 35.89 | 82.02 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 484 | 760 | 4.74697E-91 | - |
| CDD | cd00028 | B_lectin | 7 | 114 | 3.13498E-25 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 286 | 367 | 1.35523E-18 | - |
| Pfam | PF01453 | D-mannose binding lectin | 39 | 129 | 2.7E-19 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 295 | 344 | 1.4E-5 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 482 | 758 | 1.8E-55 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 212 | 271 | 8.9E-7 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 27 | 169 | 6.81E-26 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 460 | 760 | 1.31E-73 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 2 | 113 | 7.7E-17 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 552 | 7.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 553 | 775 | 1.5E-56 | - |
| SMART | SM00220 | serkin_6 | 478 | 762 | 3.6E-36 | IPR000719 |
| SMART | SM00108 | blect_4 | 7 | 114 | 8.2E-18 | IPR001480 |
| SMART | SM00473 | ntp_6 | 292 | 366 | 1.0E-4 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 1 | 775 | 7.6E-213 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 112 | 14.729635 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 290 | 367 | 8.256616 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 478 | 761 | 37.643803 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 599 | 611 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 484 | 506 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_037456741.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A077RQQ4 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 GN=TRAES_3BF271100030CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG052300.