Basic Information
Locus ID:
gene:TRIDC7AG051470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 539996151 | 540002550 | - | gene:TRIDC7AG051470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 45,842.32 Da | 47.68 | 94.29 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 118 | 148 | 0.0056 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 169 | 200 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 257 | 292 | 2.9E-7 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 9 | 300 | 1.73E-44 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 240 | 321 | 2.1E-11 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 239 | 1.5E-31 | IPR015943 |
| SMART | SM00320 | WD40_4 | 162 | 200 | 0.015 | IPR001680 |
| SMART | SM00320 | WD40_4 | 253 | 292 | 1.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 111 | 148 | 3.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 71 | 108 | 3.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 203 | 241 | 17.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 118 | 149 | 8.781968 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 260 | 301 | 16.791073 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 260 | 295 | 12.973764 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 118 | 149 | 10.441614 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 135 | 149 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 279 | 293 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 135 | 149 | 1.8E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 279 | 293 | 1.8E-8 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 187 | 201 | 1.8E-8 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49180.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037459769.1 | protein ROOT INITIATION DEFECTIVE 3-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9M3B4 | Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RMG2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG051470.