Basic Information
Locus ID:
gene:TRIDC7AG050860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 536144453 | 536149497 | - | gene:TRIDC7AG050860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 89,482.26 Da | 53.65 | 87.05 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 735 | 775 | 3.70968E-21 | - |
| CDD | cd01989 | STK_N | 64 | 187 | 9.72925E-32 | - |
| Pfam | PF04564 | U-box domain | 731 | 799 | 6.1E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 448 | 652 | 1.5E-39 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 49 | 179 | 2.6E-8 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 49 | 180 | 1.59E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 430 | 707 | 1.34E-69 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 719 | 798 | 2.56E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 520 | 730 | 2.0E-45 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 731 | 801 | 2.1E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 427 | 519 | 1.2E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 40 | 189 | 8.9E-13 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 734 | 796 | 4.0E-27 | IPR003613 |
| SMART | SM00220 | serkin_6 | 447 | 729 | 2.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 447 | 715 | 34.817001 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 730 | 801 | 34.844978 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 565 | 577 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 453 | 474 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 265 | - | - |
| Coils | Coil | Coil | 310 | 330 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57035.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037458141.1 | U-box domain-containing protein 34-like [Triticum dicoccoides] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6RM50 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG050860.