Basic Information
Locus ID:
gene:TRIDC7AG050180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 529914588 | 529923101 | + | gene:TRIDC7AG050180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 63,516.90 Da | 44.94 | 70.75 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 401 | 426 | 0.067 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 282 | 318 | 0.16 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 97 | 563 | 1.53E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 94 | 248 | 8.9E-6 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 270 | 568 | 6.8E-19 | IPR015943 |
| SMART | SM00320 | WD40_4 | 430 | 484 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 163 | 203 | 23.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 329 | 369 | 7.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 279 | 318 | 0.94 | IPR001680 |
| SMART | SM00320 | WD40_4 | 89 | 124 | 7.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 376 | 426 | 53.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 66 | 571 | 4.1E-198 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 288 | 302 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 163 | 177 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 103 | 123 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 290 | 317 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 346 | 374 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 318 | 345 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 179 | 207 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 540 | 569 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 457 | 483 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 150 | 178 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 403 | 430 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 375 | 402 | 9.5E-159 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 431 | 456 | 9.5E-159 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_037457812.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform [Triticum dicoccoides] | 0 |
| Q5Z8Z7 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0563300 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6RIU3 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG050180.