Basic Information
Locus ID:
gene:TRIDC7AG049680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
SWIM zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 517568451 | 517569453 | + | gene:TRIDC7AG049680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 29,065.77 Da | 63.12 | 73.12 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04434 | SWIM zinc finger | 64 | 92 | 1.5E-5 | IPR007527 |
| SUPERFAMILY | SSF57850 | RING/U-box | 166 | 233 | 6.8E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 147 | 256 | 4.3E-8 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 171 | 226 | 9.509172 | IPR001841 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 64 | 94 | 10.558599 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11620.1 | SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related. | 0 |
| RefSeq | XP_048543179.1 | mitogen-activated protein kinase kinase kinase 1 [Triticum urartu] | 0 |
| TrEMBL | A0A3B6RLV4 | SWIM-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG049680.