Basic Information
Locus ID:
gene:TRIDC7AG048560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 507443569 | 507444195 | - | gene:TRIDC7AG048560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 21,004.56 Da | 46.88 | 106.90 | 0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 135 | 177 | 1.7184E-17 | - |
| Pfam | PF13639 | Ring finger domain | 135 | 177 | 1.0E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 131 | 183 | 9.32E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 101 | 186 | 4.7E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 135 | 176 | 6.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 135 | 177 | 12.430266 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G40070.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048542722.1 | RING-H2 finger protein ATL74-like [Triticum urartu] | 0 |
| Q8W571 | RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3 | 0 | |
| TrEMBL | A0A3B6RIA8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG048560.