Basic Information
Locus ID:
gene:TRIDC7AG048550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 507361260 | 507361874 | + | gene:TRIDC7AG048550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 21,507.86 Da | 49.76 | 104.36 | 0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 138 | 181 | 6.5E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 134 | 187 | 1.28E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 187 | 1.5E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 139 | 180 | 0.0022 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 139 | 181 | 9.937009 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15975.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037459064.1 | RING-H2 finger protein ATL39-like [Triticum dicoccoides] | 0 |
| Q8LF65 | RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453S530 | RING-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG048550.