halophFGD

Basic Information

Locus ID: gene:TRIDC7AG048390

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: Ring finger domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
7A	506150737	506151064	-	gene:TRIDC7AG048390

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.74	4,312.91 Da	88.26	92.75	0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12678	RING-H2 zinc finger domain	1	22	2.1E-7	IPR024766
SUPERFAMILY	SSF57850	RING/U-box	1	31	1.33E-10	-
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	1	32	2.1E-9	IPR013083

Gene Ontology

Molecular Function:

GO:0008270 (zinc ion binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G53820.1	RING/U-box superfamily protein.
RefSeq	XP_037456837.1	RING-H2 finger protein ATL39-like [Triticum dicoccoides]
Swiss-Prot	P0C035	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1
TrEMBL	M7ZLV2	RING-H2 finger protein ATL60 OS=Triticum urartu OX=4572 GN=TRIUR3_09939 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7AG048390.