Basic Information
Locus ID:
gene:TRIDC7AG047820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Transducin WD40 repeat-like superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 498720123 | 498744557 | + | gene:TRIDC7AG047820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 141,390.44 Da | 42.51 | 93.17 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF69322 | Tricorn protease domain 2 | 84 | 1206 | 1.05E-20 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 784 | 1135 | 1.73E-8 | IPR016024 |
| Gene3D | G3DSA:2.130.10.10 | - | 303 | 636 | 4.8E-19 | IPR015943 |
| SMART | SM00320 | WD40_4 | 453 | 500 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1159 | 1204 | 28.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 354 | 402 | 9.9E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 405 | 450 | 87.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 389 | 411 | 10.040596 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 389 | 403 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 610 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11270.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037459887.1 | WD repeat-containing protein 7-like isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6RLE2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG047820.