Basic Information
Locus ID:
gene:TRIDC7AG045710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 470905272 | 470908688 | - | gene:TRIDC7AG045710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 50,635.00 Da | 64.17 | 70.72 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01167 | Tub family | 123 | 451 | 2.2E-114 | IPR000007 |
| Pfam | PF00646 | F-box domain | 61 | 112 | 5.9E-8 | IPR001810 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 109 | 456 | 2.88E-101 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 56 | 104 | 2.35E-6 | IPR036047 |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 119 | 450 | 1.4E-96 | IPR025659 |
| Gene3D | G3DSA:1.20.1280.50 | - | 57 | 107 | 1.1E-5 | - |
| ProSitePatterns | PS01200 | Tub family signature 1. | 362 | 375 | - | IPR018066 |
| ProSitePatterns | PS01201 | Tub family signature 2. | 441 | 456 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 192 | 216 | 4.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 242 | 269 | 4.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 362 | 378 | 4.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 344 | 361 | 4.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 413 | 432 | 4.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 434 | 456 | 4.0E-76 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 176 | 192 | 4.0E-76 | IPR000007 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 412 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25280.1 | tubby like protein 10. Member of TLP family | 0 |
| RefSeq | XP_037456990.1 | tubby-like F-box protein 12 [Triticum dicoccoides] | 0 |
| Q69U54 | Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RGU4 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG045710.