Basic Information
Locus ID:
gene:TRIDC7AG045650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 470522181 | 470526319 | - | gene:TRIDC7AG045650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 55,264.17 Da | 64.95 | 75.24 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02123 | PA_C_RZF_like | 15 | 160 | 1.48813E-47 | IPR044744 |
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 237 | 280 | 2.01583E-22 | - |
| Pfam | PF02225 | PA domain | 85 | 146 | 1.2E-9 | IPR003137 |
| Pfam | PF13639 | Ring finger domain | 237 | 280 | 7.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 218 | 292 | 1.9E-19 | - |
| SUPERFAMILY | SSF52025 | PA domain | 85 | 148 | 1.83E-8 | - |
| Gene3D | G3DSA:3.50.30.30 | - | 26 | 161 | 1.5E-27 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 198 | 285 | 5.3E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 238 | 279 | 1.8E-9 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 238 | 280 | 12.326995 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71980.1 | Protease-associated (PA) RING/U-box zinc finger family protein. | 0 |
| RefSeq | XP_037458017.1 | receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q69U49 | Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RMR1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6RKS8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG045650.