Basic Information
Locus ID:
gene:TRIDC7AG045320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
FAS2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 466515800 | 466520835 | - | gene:TRIDC7AG045320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 57,598.65 Da | 48.42 | 81.82 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 367 | 392 | 0.17 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 86 | 120 | 0.017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 136 | 169 | 6.8E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 176 | 210 | 0.001 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 40 | 69 | 0.015 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 402 | 3.43E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 282 | 441 | 2.4E-7 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 22 | 281 | 3.1E-45 | IPR015943 |
| SMART | SM00320 | WD40_4 | 82 | 121 | 2.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 356 | 396 | 0.93 | IPR001680 |
| SMART | SM00320 | WD40_4 | 172 | 211 | 2.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 32 | 70 | 0.0052 | IPR001680 |
| SMART | SM00320 | WD40_4 | 130 | 169 | 1.8E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 89 | 130 | 12.112524 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 45 | 79 | 10.441614 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 89 | 124 | 10.047417 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 137 | 178 | 12.480124 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 137 | 169 | 10.205597 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 179 | 210 | 9.505904 | IPR001680 |
| PRINTS | PR00319 | Beta G protein (transducin) signature | 137 | 153 | 2.6E-5 | IPR001632 |
| PRINTS | PR00319 | Beta G protein (transducin) signature | 193 | 210 | 2.6E-5 | IPR001632 |
| PRINTS | PR00319 | Beta G protein (transducin) signature | 156 | 170 | 2.6E-5 | IPR001632 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 521 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64630.1 | Transducin/WD40 repeat-like superfamily protein. Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. | 0 |
| RefSeq | XP_037459133.1 | chromatin assembly factor 1 subunit FAS2 homolog [Triticum dicoccoides] | 0 |
| Q6ZD63 | Chromatin assembly factor 1 subunit FAS2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=FAS2 PE=2 SV=1 | 0 | |
| TrEMBL | M7ZMP5 | Chromatin assembly factor 1 subunit B OS=Triticum urartu OX=4572 GN=TRIUR3_22478 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG045320.