Basic Information
Locus ID:
gene:TRIDC7AG042830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 430131811 | 430133435 | + | gene:TRIDC7AG042830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 37,130.17 Da | 39.17 | 105.10 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 13 | 54 | 4.03933E-25 | - |
| Pfam | PF04564 | U-box domain | 10 | 74 | 1.9E-19 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 7 | 74 | 4.12E-27 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 109 | 354 | 2.62E-23 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 8 | 80 | 1.3E-28 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 103 | 356 | 4.0E-23 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 12 | 76 | 5.6E-35 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 8 | 83 | 31.01479 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21350.1 | plant U-box 8. Encodes a U-box/ARM repeat protein required fore self-incompatibility. | 0 |
| RefSeq | XP_048542022.1 | U-box domain-containing protein 8 [Triticum urartu] | 0 |
| O81902 | U-box domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUB8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RK70 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG042830.