Basic Information
Locus ID:
gene:TRIDC7AG042430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Pex2 / Pex12 amino terminal region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 424325800 | 424331389 | - | gene:TRIDC7AG042430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.78 | 38,677.36 Da | 36.83 | 83.08 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16526 | RING-HC_PEX2 | 290 | 332 | 1.59664E-16 | - |
| Pfam | PF04757 | Pex2 / Pex12 amino terminal region | 64 | 276 | 2.8E-39 | IPR006845 |
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 291 | 331 | 4.8E-6 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 286 | 337 | 2.34E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 274 | 344 | 1.2E-8 | IPR013083 |
| SMART | SM00184 | ring_2 | 291 | 331 | 3.5E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 291 | 332 | 10.645153 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 307 | 316 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79810.1 | Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein. Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes. | 0 |
| RefSeq | XP_037458213.1 | peroxisome biogenesis protein 2-like [Triticum dicoccoides] | 0 |
| Q9CA86 | Peroxisome biogenesis protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453RYD7 | Peroxin-2 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG042430.