Basic Information
Locus ID:
gene:TRIDC7AG037560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 306392903 | 306405094 | - | gene:TRIDC7AG037560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 107,772.66 Da | 54.73 | 70.51 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 466 | 768 | 1.31908E-129 | - |
| Pfam | PF01753 | MYND finger | 117 | 154 | 1.5E-9 | IPR002893 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 465 | 767 | 9.0E-46 | IPR001394 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 114 | 156 | 3.14E-11 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 461 | 773 | 9.81E-86 | IPR038765 |
| Gene3D | G3DSA:6.10.140.2220 | - | 107 | 158 | 7.3E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 458 | 781 | 7.3E-92 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 465 | 770 | 51.533283 | IPR028889 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 117 | 154 | 11.576741 | IPR002893 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 117 | 154 | - | IPR002893 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 466 | 481 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 843 | 880 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 959 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 839 | 880 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 917 | 950 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 935 | 950 | - | - |
| Coils | Coil | Coil | 36 | 63 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037463105.1 | ubiquitin carboxyl-terminal hydrolase 17-like [Triticum dicoccoides] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RJ72 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG037560.